News

Releases, Media, Announcements, etc.

OmicsBox 3.5 Release

We are pleased to announce a new OmicsBox release focused on improving your experience. You provided valuable feedback, and we listened carefully. This update introduces thoughtful improvements across the platform, making it smoother, faster, and more reliable to support your daily research. Here are a few highlights. Find the complete release notes here: General Improvements: The Table Export feature has

Read More »

BioBam at the LongTREC Summer School

  Our team member and PhD student Fabian Jetzinger recently contributed to the organization of the LongTREC summer school, held at the Earlham Institute in Norwich, UK. The 4-day course, organized by the MSCA doctoral network LongTREC welcomed 27 participants from across Europe for an intensive introduction to bioinformatic analyses of long-read transcriptomics data. A diverse range of complex topics

Read More »

OmicsBox in a New Scientific Publication on Sorghum Stress Responses

  At BioBam we are proud to see OmicsBox supporting scientific research. It is always rewarding to witness our users making significant advances in their respective fields and publishing their findings in esteemed journals such as Nature Scientific Data. These publications reinforce OmicsBox’s role as a valuable tool in bioinformatics, helping researchers analyze complex datasets with precision and efficiency. A

Read More »

LongTREC Secondments at BioBam: Advancing Long-Read Transcriptomics Through Collaboration

The LongTREC Marie Skłodowska-Curie Actions Doctoral Networks is an innovative European initiative that advances transcriptomics through Long-Read RNA Sequencing (lrRNA-seq). PhD candidates participating in LongTREC benefit from collaborative opportunities with public and industry partners, gaining invaluable expertise while developing advanced tools and workflows.  As part of the LongTREC network, BioBam hosts secondments and offers an unique environment where academia meets

Read More »

OmicsBox 3.4: CellKb’s Advanced Cell-Type Annotation

Improved Metagenomics Classification, and Enhanced Long-Read Transcriptomics Pipelines We proudly present the OmicsBox Version 3.4 release that introduces a range of enhancements designed to address the evolving needs of modern genomics and transcriptomics research. A key highlight of OmicsBox 3.4 is the integration of CellKb, a robust cell-type prediction tool for single-cell RNA sequencing (scRNA-Seq) analysis. CellKb streamlines scRNA-Seq annotation

Read More »

BioBam Joins BIOVALSA: Innovative Valorization of Plant Biomass Waste in Valencia for Functional Bioplastic Production

We are proud to contribute to BIOVALSA, an initiative supported by the Instituto Valenciano de Competitividad e Innovación (IVACE+i). This collaboration unites leading Valencian organizations such as AIMPLAS, VIROMII, Prime Biopolymers, UPV, and BioBam. The project focuses on transforming agricultural residues—such as rice straw and citrus prunings—into high-value bioplastics like polylactic acid (PLA) and polybutylene succinate (PBS), used across various

Read More »

BioBam at LongTREC meeting in Sweden

Our Teammate and PhD student Fabian Jetzinger, part of the LongTREC MSCA doctoral network, recently spent two months in Stockholm to collaborate with the developers of the isONpipeline tools. This pipeline, part of the OmicsBox Transcriptomics module, facilitates reference-free transcriptome reconstruction from Oxford Nanopore or PacBio long-read RNA sequencing data. Learning from their expertise and bringing in his own set

Read More »

OmicsBox in SEBiBC First Congress: End-to-end Single Cell Data Analysis Poster

  At BioBam we were thrilled to attend and sponsor the First Congress of Sociedad Española de Bioinformática i Biología Computacional (SEBiBC) in Valencia, a gathering of experts and researchers in bioinformatics and computational biology. Thanks to our colleague Marta Benegas, we had the opportunity to showcase our work advancing single-cell RNA sequencing (scRNA-Seq) analysis this year. Single-cell RNA sequencing

Read More »

OmicsBox 3.3 Release

BioinformaticsWe are excited to announce the release of OmicsBox 3.3, the All-In-One bioinformatics software, designed to simplify your research. This latest version integrates a range of new features and improvements, offering improved usability, advanced functionalities, and expanded database support to meet the diverse needs of the bioinformatics community. With a focus on providing powerful tools and resources, OmicsBox 3.3 brings

Read More »
Search

Blog Categories:

News

Releases, Media, Announcements, etc.

Tips And Tricks

Mini-tutorials for common use-cases and to address frequently asked questions FAQs

Video Tutorials

Helpful Features, Tips and Tricks

Use Cases, Reviews, Tutorials

Product Tutorial, Quickstarts, New Features, etc.

Most Popular: