Support
Professional Bioinformatics Support
Our support and development team works closely together to take care of all the issues you might have, does not matter if rather technical, about bioinformatics or biology.
You can reach us a support@biobam.com and we will do our best to answer all requests within one day. All comments and suggestions regarding our services are most welcome and a valuable source of information for us.
To share your experiences or to search for a specific solution with OmicsBox please log in to your user community account here.
For Blast2GO Support you are also most welcome to join our open mailing list. We use a Google Groups as a forum and news group.
Thank you in advance for your future contributions.
White Papers
Download white papers, product sheets and brochures.
- OmicsBox
- OmicsCloud
- Blast2GO PRO Plugin for the CLC Genomics Workbench
- Blast2GO Command Line Tools
Documentation
Please find here all our product online user manuals.
- OmicsBox
- Blast2GO PRO Plugin for the CLC Genomics Workbench
- Blast2GO Command Line Tools
- Blast2GO (legacy)
Example Datasets
OmicsBox Example Datasets to get started with the different Modules.
Teaching Material
Use OmicsBox to explain basic bioinformatics concept like sequence alignments with BLAST, functional annotation with the Gene Ontology, public biological databases, NGS data analysis pipelines, etc.
If you are planning a teaching activity, please let us know and we may provide you with teaching presentations, practical sessions including exercises with solution and datasets.
Please write to us: support@biobam.com
We are here to help!
If you have any comments, suggestions or whatever trouble with OmicsBox, Blast2GO or any other product or service and want to get directly in touch with us, please write an e-mail to support@biobam.com
Video Library
-
How to use "Retrieve Blast Top-Hit"
This video shows how to use the "Retrieve Blast Top-Hit" tool in Blast2GO to replace the Blasted sequences of a dataset with the top-hit ones found after a Blast search. -
New RNA-Seq Features in Blast2GO 5
This video shows new RNA-Seq features incorporated in Blast2GO 5: FastQ Preprocessing and Quality Assessment, de novo Transcriptome Assembly, Gene Expression Quantification, and Differential Expression Analysis. -
Blast2GO Webinar
Transcriptome Annotation, RNA-Seq Analysis and Functional Insights into the Cactus Root Development -
How to create Workflows with Blast2GO
This video shows step-by-step how to create, configure and run a bioinformatics workflow in Blast2GO. -
Estimating Transcript-Level Expression with Blast2GO
The Transcript-Level Quantification feature of Blast2GO allows to quantify the gene and isoform expression of RNA-seq datasets. This video shows step-by-step how to create a count table of raw reads and explains in detail the different concepts of expression quantification. -
Quantify Expression with Blast2GO
The "Create Count Table" feature of Blast2GO allows to quantify the gene expression of RNA-seq datasets. This video shows step-by-step how to create a count table of raw reads and explains in detail different concepts of expression quantification. -
Coding Potential Assesement Tool with Blast2GO
This video shows how to use the 'Coding Potential Assessment Tool' in Blast2GO. It helps to distinguish coding from non-coding transcripts and to detect new mRNA. -
NCBI GenBank Submission with Blast2GO
This video shows how to use the 'Create NCBI GeneBank Genome Submission Files' application that eases the creation of the files required to submit your annotated sequences to the NCBI database, like the Asn1 (.sqn) file. -
Time Course Expression Analysis with Blast2GO
This video shows a basic use-case of a time course differential expression analysis of RNA-seq data with Blast2GO. This straightforward feature is based on the popular maSigPro package, works with raw read counts and offers many different summary charts.
