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SPAdes OmicsBox ScreenShot

New Genome Analysis Features

Release OmicsBox version 1.2 (24th of October, 2019) We are happy to announce the following updates for the genome analysis module. New feature includes a new DNA-Seq de novo assembly strategy based on SPAdes.More details can be found below as well as in the online user manual and Genome Analysis Module website. DNA-Seq de Novo Assembly: SPAdes SPAdes (St Petersburg genome

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Busco OmicsBox Screenshot

New Transcriptomics Features

Release OmicsBox version 1.2 (24th of October, 2019) We are happy to announce the following updates for the transcriptomics module. New features include Completeness Assessment and Predict Coding Regions. More details can be found below as well as in the online user manual and Transcriptomics Module website. Completeness Assessment The Completeness Assessment functionality provides quantitative measures for the assessment of transcriptome assembly completeness, based on

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New Metagenomics Features

Release OmicsBox version 1.2 (24th of October, 2019) We are happy to announce the following updates for the metagenomics module. New feature include OTU Differential Abundance Testing and several new taxonomy plots: Chao1 Diversity, Rarefaction Curves and PCoA. More details can be found below as well as in the online user manual and Metagenomics Module website. New Taxonomy Statistics and Plots

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BioBam Student Scholarship – Apply Now!

We are happy to announce that during the next 6 month, starting on the 1st of July, we will grant a full-featured 6-month OmicsBox subscription to 5 selected student projects – each month! Please submit before the 15th of each month to participate. Please send us a short description (200 words max.) of your research project including planned bioinformatics work and

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BioBam at the 6th Microbiome R&D Forum in Rotterdam

In May, our colleague David Seide attended this year’s Microbiome & Probiotics in Rotterdam, the Netherlands organized by Global Engage. The event is a combination of 3 events, the 6th Microbiome R&D & Business Collaboration Forum, the 3rd Probiotics Congress and the Skin Microbiome & Cosmeceuticals Congress. This global microbiome and probiotics conference series brought together more than 300 industry,

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BioBam at the BioIT April 2019

Last April, the BioBam Team attended the Bio-IT World Conference & Expo in Boston and launched OmicsBox v.1.0. OmicsBox is BioBam’s latest offering, a bioinformatics software solution for the analysis of NGS data for different omics applications. OmicsBox provides four modules: The Functional Analysis module which includes the popular Blast2GO Functional Annotation software – BioBam’s flagship for functional genomics studies.

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