How to retrieve KEGG Pathways in OmicsBox

How to retrieve KEGG Pathways in OmicsBox

The short article describes how to install the KEGG Pathway App and how to use it to find and highlight pathways related to a list of sequences/genes/proteins of interest in OmicsBox.


KEGG, the Kyoto Encyclopedia of Genes and Genomes

KEGG is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies.

KEGG Pathways is freely available as an App which can be installed in OmicsBox from the App Manager under the Help menu.

OmicsBox has to be restarted in order to complete the installation. The load KEGG Maps can be found under Functional Analysis > Blast2GO Annotation > Enzyme Code Mapping.

Kegg Pathway in OmicsBox
The Pentose Phosphate KEGG Pathway in OmicsBox highlighting a number of relevant enzymes.

For more information, please have a look at the OmicsBox online User Manual.
For additional OmicsBox Apps please visit the App Directory.

Information about KEGG, the Kyoto Encyclopedia of Genes and Genomes can be found here:

KEGG Pathway in OmicsBox
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