How to export Gene Finder GFF output with GO terms.
Mariana Monteiro
November 22, 2018
This article explains how to export a GFF file with GO terms in Blast2GO.
Load FASTA sequences from Reference and GFF file
Mariana Monteiro
October 26, 2018
Sometimes databases provide the whole genome and the GFF or GTF files but not the exon or CDS FASTA files.With OmicsBox/Blast2GO it is possible to load a Fasta sequences and to extract the exons or the CDS from the genome using the GFF file.
Expression Quantification at Gene-Level
Carlos Menor
April 7, 2017
The “Create Count Table” feature of OmicsBox/Blast2GO allows quantifying the gene expression of RNA-seq datasets. This video shows step-by-step how to create a count table of raw reads and explains in detail different concepts of expression quantification. The available parameters are inspired by the popular HTSeq Python Package (reference below).
