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Blast2GO Previous Versions

Latest Versions 5.2

Previous Blast2GO Versions

If you need to downgrade to a previous version of Blast2GO please download the corresponding installer from here. Please note that you must uninstall any previous installation of Blast2GO first.

Blast2GO 5.1.13

Blast2GO 4.1.9

Blast2GO Version History

  • Fix to prevent B2G files from becoming corrupted
  • Improve GFF export functions
  • Improve error handling on truncated GFF input
  • Fix Extract Fasta from GFF feature hierarchy
  • Improve GFF/GTF attribute detection
  • Improve GTF gene structure visualization
  • Fix KEGG objects save issue
  • Improve GSEA memory handling
  • Improve Workflows inputs/outputs handling
  • Improve Generic Statistics side-panel
  • Load TimeLogic file parsing improvements
  • Minor Fixes
  • Import Blast Results: minor bug fixes
  • Workflows: minor bug fixes and improvements
  • Kegg: memory optimizations
  • GO Graphs: memory optimizations when exporting png
  • InterPro Scan: improve progress communication
  • NCBI Blast: improve communication in case of errors
  • Create Count Table: memory and performance optimizations
  • Venn Diagrams
  • FastQ Pre-Processing (Adapters, Quality, Length)
  • Workflows allow regular files as input and output
  • Context Menu for GFF and VCF tables
  • GSEA with “No Filter” option
  • Minor bug fixes and improvements
  • Improved Sequence Viewer
  • Genome Browser performance improvements
  • RNA-Seq De-Novo Assembly report improvements
  • Changed colors for up(red)/down(green) regulated pairwise statistics
  • KEGG with https connection
  • Rfam connection improvements
  • Minor bug fixes and improvements
  • FastQ Quality Check
  • RNA-Seq DeNovo Assembly
  • Combined Genome Browser Visualization
  • Support for Variant Call Format
  • Merge Blast2GO Projects using the File Manager
  • Interactive Heatmap from Pairwise Results
  • Network License Support
  • InterProScan in the Cloud (CloudIPS)
  • Workflows (Create, View, Run)
  • De-Novo Transcript Level Quantification (Fasta + FastQ)
  • Blast Result Alignment Viewer
  • High Performance GFF File Viewer
  • PDF Reports for “RNA-Seq” and “Gene Finding” features
  • New Gene Ontology ID-Mapping Strategy (faster, more complete, “gi” independent)
  • New design for many result pages
  • “Find Similar Sequences” performance improvements
  • Faster Species Taxonomy Queries
  • Preferences: Define Memory and Temporary Files Settings
  • Preferences: Choose Gene Ontology Version: latest or month
  • Improved “Cloud Usage” Monitor
  • CloudBlast now for multiple Projects in parallel
  • Prokaryotic GeneFinding (Glimmer): Improved Perform. and Report
  • GO Graph Visualisation: Improved Filtering
  • InterProScan: Improved Communication
  • Rfam: Merge GOs to Projects
  • BioMart: More Stable Data Retrieval
  • Minor Bug Fixes
  • RNAseq Read Count to Quantify Expression (BAM + GFF)
  • Coding Potential Assessment (CPAT)
  • New Result Table (side-panel, tags, colors, filters, context menu)
  • Enrichment analysis now for ANY functional label
  • Differential Expression Analysis with improved visualisations
  • Faster Gene Finding
  • Memory and CPU Monitor
  • Improved “Extract Fasta” feature (GFF + Ref-Fasta)
  • Improved GFF table to easily search and filter attributes
  • Gene Finding: RNA-Seq Exon Support for Augustus
  • Differential Expression Count Table: Improved format check
  • GSEA enriched GO Gene-List export feature
  • NCBI Blast: Improved application messages
  • File Manager: Improved performance
  • Minor Bug Fixes
  • Differential Expression Analysis for Pairwise and TimeCourse
  • Gene Finding for Eukaryotes and Prokaryotes
  • Gene Set Enrichment Analysis (GSEA)
  • ID and Sequences Conversion by: Extract Top Hit Sequences via Blast and Blat
  • New App Manager now with Blast2GO “Featured” Apps
  • Blast2GO Featured App: Create NCBI Submission Files
  • New App: Ortholog Group Finder (COG/EggNOG)
  • New Load and Export Functions: CountTable, GFF3 Object, ID-Value List, Generic Table
  • New Organic Graph Layout
  • Generic Table Column have now a (Un)Select All function
  • We added Icons to the Load, Export and Context Menu
  • Improved QBlast and Local Blast (now version 2.4) behaviour
  • Improved Proxy Settings (now available via the activation dialog)
  • Fixed InterProScan Bug with ORF prediction
  • New BASIC feature: Easily create and blast against a local databases.
  • New filters can be applied during the annotation step. These filters allow e.g. to easily perform a “Top-Hit-with-GOs” annotation.
  • New feedback forms allows us to improve Blast2GO with the help of your input.
  • The new Blast2GO App Manager allows to add additional tools to Blast2GO.
  • Predict bacterial protein subcellular localization annotations with PSORTb 3.
  • The “Translate longest ORF” feature has now many more options and allows you to choose the open reading frame based on the Top Blast Hit.
  • Create distribution charts (dot, bar, line) of any of your generic table columns.
  • Easily find and remove highly similar and/or redundant sequences within large datasets using the BLAT algorithm.
  • Faster Gene Ontology Mapping in BASIC mode via web services (no direct mysql connection with an open network port 3306 needed).
  • New interactive offline Gene Ontology graph visualisation.
  • Blast results in new XML2 format for improved Gene Ontology Mapping and taxonomy information.
  • Analysis history for all Blast2GO files.
  • Improved Gene Ontology import for gene symbol, accession and GenBank ID lists.
  • Improved InterProScan XML import.
  • Merge Blast2GO datasets direclty from within the FileManager.
  • Top Blast Hit export now available in the Generic Export function.
  • Several new summary charts for the Gene Ontology Mapping and the InterPro step.
  • Work with multiple datasets in paralell (PRO feature).
  • Use the FileManager to organize your datasets and results.
  • Save and reopen all analysis results like graphs, charts, enrichments, etc.
  • Run RFAM analysis. Detect non-coding RNA, cis-regulatory elements or self-splicing RNAs (via EMBL-EBI webservice).
  • WordCloud or Treemap viewer allow to summarize functional profiles.
  • Extract FASTA sequences via GFF/GTF files.
  • Extract subsets and ID list from your project.
  • Customize your sequence table columns (e.g. remove columns you are not interested in).
  • A new Fast-Blast option to speed-up your blast results.
  • Blast2GO in a fresh new look.
  • Many performance, design and user interface aspects have been improved.
  • Progress bars, application messages and many other tools make working with Blast2GO now more efficient.
  • Last release of the Blast2GO Java WebStart version.
  • The development and maintenance/update of this version is now discontinued.

Try OmicsBox - Includes all Blast2GO Features

Get familiar with all new Modules and Features.
OmicsBox works out of the box on any standard PC or laptop with Windows, Linux and Mac. 

 

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A solution to ease your bioinformatics data analysis. 

Analyse all your NGS data right away with all the latest bioinformatics tools available.

  • Quality Control And Assessment
  • De-Novo Assembly
  • Repeat Masking
  • Gene Finding
  • Coding Potential
  • Quality Control
  • Quantify Expression
  • De-Novo Assembly
  • RNA-Seq Alignment
  • Differential Expression Analysis
  • High-Throughput Blast and InterProScan
  • Gene Ontology Mapping
  • Blast2GO Annotation
  • Enrichment Analysis
  • Functional Interpretation
  • Quality Control And Assessment
  • Taxonomic Classification
  • Metagenomic Assembly
  • Gene Prediction
  • Functional Annotation